European forests in the spotlight and how satellites can help monitor them

We are officially in the UN Decade on Ecosystem Restoration (2021 – 2030), which is global movement to prevent, halt and reverse the degradation of ecosystems. Whichever way you look at ecosystem restoration, chances are that you will eventually encounter trees, and by extension forests. Here in Sweden, forests have been in the national discourse since the EU’s new forest strategy for 2030 came out in July 2021.

An ethical blind spot in the natural sciences

Some disciplines such as cultural anthropology are better adept at recognizing power imbalances than others due to decades of field research on human society and mistakes learnt from earlier work. Although natural scientists conduct field research that is often not directly about people but their field sites, for example climate stations, flux towers, geological formations, or bird colonies, are frequently located where people live. Yet, there is a lack of awareness of the power dynamic between the scientists themselves and the local community where the research is being conducted.

Remembering Simon Aspinall

Today marks ten years since the passing of Simon Aspinall. Few people have impacted the trajectory of my career as much as Simon has. When I was 13, I developed an interest in natural history, which gradually turned into an interest in birds. I suppose it was an evolutionary progression since I was quite interested in dinosaurs when I was younger and memorized the names of many of them.

Nomination for WWF's "Environmental Hero" award

In mid-September I got an email that said “ditt arbete med Birding Therapy som en av de nominerade av Årets Miljöhjälte i kategorin biologisk mångfald” (your work with Birding Therapy is one of the nominees for this year’s Environmental Hero award in the biodiversity category"). At first I didn’t know what to think and thought it was a phishing/malware type of spam. But then it sunk in that this is real, and it’s difficult to put into words how I felt. I didn’t think that anyone was paying attention to the small side project I started to get more people, particularly underrepresented groups, out into nature and birding.

TEDx talk on “Satellites for Everyone”

My TEDx talk is now available on YouTube. The basic premise of the talk is that when you put all the recent advances in perspective, it results in a democratization of data on one hand, and science on the other. It means that anyone with a computer and a decent internet connection can have access to satellite data, process them using open source methods and extract information for their own use. This not only helps accelerate the rate at which scientific discoveries are made but also makes knowledge sharing and international development more equitable and inclusive.

Perform a Mann-Kendall trend test on satellite image time series in R

The Mann-Kendall trend test has become popular in the remote sensing community to test whether a time series of satellite observations is consistently increasing or decreasing. In this post, I developed a function in R that can take in raster stacks or bricks to perform the Mann-Kendall trend test and calculate its statistical significance (p values).

Keynote Talk: “Earth from Space” at Astronomins dag och natt 2020

I was thrilled to be provided the opportunity to be a keynote speaker for Astronomins dag och natt or “Astronomy’s day and night” organized annually by the Swedish Astronomical Society. The event is in its 9th year and the theme for 2020 is Earth 2.0 and the intersection of the possibility of life in space and the possibilities that Earth observation offers to better understand our own planet.

Tutorial: Machine learning classification of Sentinel-2 satellite imagery using R [Updated]

Note: This tutorial was updated on April 20th, 2020 based on reader feedback.

In this short post, I would like to help you conduct your own machine learning classification of Sentinel-2 data using the open source package R. The process is pretty straightforward if you have experience in remote sensing and image classification. Even if you don’t have extensive experience, basic knowledge of remote sensing terminology is sufficient.

Test pixelwise correlation between two time series of gridded satellite data in R

Satellite time series data are useful for studying biophysical how variables change over time and understanding what causes those changes. Recently, I was looking into correlating two time series datasets over Africa to look at the relationship between net primary production (NPP) and rainfall. After a futile attempt to find an “out-of-the-box” software package that does this, I created an R function to speed things up.